Publications
-
Graph-guided random forest for gene set selection
Machine learning methods can detect complex relationships between variables, but usually do not exploit domain knowledge. This is a limitation because in many scientific disciplines, such as systems biology, domain knowledge is available in the form of graphs or networks, and its use can improve model performance. We need network-based algorithms that are versatile and…
-
Network module detection from multi-modal node features with a greedy decision forest for actionable explainable AI
Machine learning methods can detect complex relationships between variables, but usually do not exploit domain knowledge. This is a limitation because in many scientific disciplines, such as systems biology, domain knowledge is available in the form of graphs or networks, and its use can improve model performance. We need network-based algorithms that are versatile and…
-
Towards multi-modal causability with graph neural networks enabling information fusion for explainable AI
AI is remarkably successful and outperforms human experts in certain tasks, even in complex domains such as medicine. Humans on the other hand are experts at multi-modal thinking and can embed new inputs almost instantly into a conceptual knowledge space shaped by experience. In many fields the aim is to build systems capable of explaining…
-
Classification by ordinal sums of conjunctive and disjunctive functions for explainable AI and interpretable machine learning solutions
We propose a novel classification according to aggregation functions of mixed behaviour by variability in ordinal sums of conjunctive and disjunctive functions. Consequently, domain experts are empowered to assign only the most important observations regarding the considered attributes. This has the advantage that the variability of the functions provides opportunities for machine learning to learn…
-
The featurecloud ai store for federated learning in biomedicine and beyond
Machine Learning (ML) and Artificial Intelligence (AI) have shown promising results in many areas and are driven by the increasing amount of available data. However, this data is often distributed across different institutions and cannot be shared due to privacy concerns. Privacy-preserving methods, such as Federated Learning (FL), allow for training ML models without sharing…
-
KANDINSKYPatterns–An experimental exploration environment for Pattern Analysis and Machine Intelligence
Machine intelligence is very successful at standard recognition tasks when having high-quality training data. There is still a significant gap between machine-level pattern recognition and human-level concept learning. Humans can learn under uncertainty from only a few examples and generalize these concepts to solve new problems. The growing interest in explainable machine intelligence, requires experimental…
-
Towards Visual Concept Learning and Reasoning: On Insights into Representative Approaches
The study of visual concept learning methodologies has been developed over the last years, becoming the state-of-the art research that challenges the reasoning capabilities of deep learning methods. In this paper we discuss the evolution of those methods, starting from the captioning approaches that prepared the transition to current cutting-edge visual question answering systems. The…
-
Property-based testing for parameter learning of probabilistic graphical models
Code quality is a requirement for successful and sustainable software development. The emergence of Artificial Intelligence and data driven Machine Learning in current applications makes customized solutions for both data as well as code quality a requirement. The diversity and the stochastic nature of Machine Learning algorithms require different test methods, each of which is…
-
Explainable AI methods-a brief overview
Explainable Artificial Intelligence (xAI) is an established field with a vibrant community that has developed a variety of very successful approaches to explain and interpret predictions of complex machine learning models such as deep neural networks. In this article, we briefly introduce a few selected methods and discuss them in a short, clear and concise…
-
Classification and Visualization of Patterns in Medical Images
Histopathology and cytopathology developed for the microscopic examination of tissue samples a specific terminology to describe type and shape of objects and patterns in the composition of nuclei, cells, tissue and anatomical elements. We map such a terminology to Bertin’s visual variables and propose three methods to describe “shape grammar” (1) With a formal, mathematical…